| Common name: | COP3,CHR1,CSOA |
| Defline: | (1 of 7) PF01036 - Bacteriorhodopsin-like protein (Bac_rhodopsin); Channelrhodopsin 1 |
| Description: | Also described as Chlamydomonas Sensory Opsin A and Chlamoypsin 3; light-gated proton channel rhodopsin; contains N-terminal rhodopsin domain and C-terminal membrane-associated domain; dominant Phototaxis Photoreceptor, involved in the photoshock response; isolated from eyespot membranes; trafficking into the eyespot and flagella is IFT-mediated |
| Synonyms: | CSOA,COP3,g14735.t1 |
| Chromosome: | chromosome 14 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013684_1 | CLIP2.013684 | intron | 80 | 6.1 |
| CLIP2.015430_1 | CLIP2.015430 | CDS | 80 | 6.1 |
| CLIP2.015430_2 | CLIP2.015430 | CDS | 80 | 6.1 |
| CLIP2.038247_1 | CLIP2.038247 | intron | 80 | 6.1 |
| CLIP2.044009_1 | CLIP2.044009 | intron | 80 | 6.1 |
| CLIP2.044009_2 | CLIP2.044009 | intron | 80 | 6.1 |
| LMJ.RY0402.111357_1 | LMJ.RY0402.111357 | intron | 95 | 5.5 |
| LMJ.RY0402.111357_2 | LMJ.RY0402.111357 | intron | 95 | 5.5 |
| LMJ.RY0402.150153_1 | LMJ.RY0402.150153 | CDS | 73 | 5.5 |
| LMJ.RY0402.178610_1 | LMJ.RY0402.178610 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.178610_2 | LMJ.RY0402.178610 | 3'UTR | 95 | 5.5 |
| PFAM: | PF01036 |
| PANTHER: | PTHR28286 PTHR28286:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0016020 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.