Insertion junction: LMJ.RY0402.178610_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.178610
Chromosome:chromosome 14
Location:494341
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g611300 COP3,CHR1,CSOA (1 of 7) PF01036 - Bacteriorhodopsin-like protein (Bac_rhodopsin); Channelrhodopsin 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTCAACAGGCAGCACTTGCAGGACTAT
Internal bar code:TCAATGTGATACGCCGATTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:99.4431
LEAP-Seq n confirming:1250
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGGCCAGAAACAGACC
Suggested primer 2:GGGGAAGAAGAGGCTACCAC