Insertion junction: CLIP2.044264_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044264
Chromosome:chromosome 3
Location:8079838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201250 (1 of 1) PF01585//PF12171 - G-patch domain (G-patch) // Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCTTGGATGCCCTACCGCCGCCCCCTGGTCACCCAGCCCTTCAGAT
Internal bar code:AGGCCCGTCGAATAAACTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3005
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGTCCGTGCACCTTGA
Suggested primer 2:CCTCAGCACTTGACCCAGAG