Insertion junction: CLIP2.044278_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044278
Chromosome:chromosome 10
Location:3125833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441650 (1 of 1) PF06650//PF16908 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATCTGGGACATGAGCAGCTGCAGGCTGGGGTCCACGAACGGCATGGA
Internal bar code:TCCCAGTTAGAAAGTCTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3766
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGAGCCTCTTCACCATG
Suggested primer 2:CTCGAATGAATGCGGCTTGG