Insertion junction: CLIP2.044623_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044623
Chromosome:chromosome 11
Location:4337292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482650 EZY3 Early zygote expressed protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCGAAGGAGGGTTTGGCCTTTGGAGTCAGTGCTCAGTTGCGATTTGG
Internal bar code:GAGTTAGCCGTTTGAATTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1642
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTTCAAAGCACACCCTG
Suggested primer 2:CTCAGCAATCAAATCCGGCG