Insertion junction: CLIP2.044632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044632
Chromosome:chromosome 2
Location:6434346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388400 RAT1 (1 of 1) PF07798 - Protein of unknown function (DUF1640) (DUF1640); Chloroplast tscA maturation factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGCGTTCGCGATTGTGGCAGGCAGCAGAACGGTAAGTCCCTAAGCC
Internal bar code:ATGAATGCTTATCAGGACGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAACGTCCTGGACAAGA
Suggested primer 2:GGCGGCTAGTGGACTATCAC