Insertion junction: CLIP2.044642_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044642
Chromosome:chromosome 13
Location:4872664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605150 MSD2 Mn superoxide dismutase; (1 of 1) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTCCAGGCGTGTAGTCGGGTGCAGCCAGGCGTGTAGTCGGCTGCAGC
Internal bar code:GTTTACTCCAATTATATTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3042
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTCTGCCAGTTGACGAT
Suggested primer 2:TACGGGACAAGGAGGAGGAG