Insertion junction: CLIP2.044675_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044675
Chromosome:chromosome 6
Location:3104690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCGACCGGCCGGTCGGGCGCAGTCGCAAGGAGGCCCAACGCGAGGG
Internal bar code:GTTAGCTTAATGTCATACGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1754
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCTTCTTTCCTGCCCT
Suggested primer 2:GCTGTGACATGGATGAGGCT