Insertion junction: CLIP2.044713_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044713
Chromosome:chromosome 17
Location:1703611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708150 HTR36,HTR26 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGTCCACCGGTGGCAAGGCGCCCCGCAAGCAGCTGGCCACCAAGGC
Internal bar code:GGCCCTGCTTGCGGCATATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGGCATGATGGTCAC
Suggested primer 2:CTGTGGATGCACCTGACCAT