Insertion junction: CLIP2.045067_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045067
Chromosome:chromosome 13
Location:1890732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575650 (1 of 2) PTHR24056//PTHR24056:SF107 - CELL DIVISION PROTEIN KINASE // CYCLIN-DEPENDENT KINASE 11A-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGCTGCACACCCGAGCCCTCCAGCAAGCTGCCACCCGCTCCGCCAC
Internal bar code:TCGTGTGCCCCCGCTGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:564
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCCCACCTTTCCATCCT
Suggested primer 2:TGCAGGCGAACAAGCTTTTC