Insertion junction: CLIP2.045309_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045309
Chromosome:chromosome 11
Location:370467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467579 CSC6 Chlamydomonadale-specific family C protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGTCGGGACTGCAGTCCTGCACCGGTTGCAAACGGGGCACCGCGAC
Internal bar code:GATCATCGTTCGTTATTAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1452
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCCTGTAAGCCGGAAAA
Suggested primer 2:GATTCTGGCACCTGCTCCTT