Insertion junction: CLIP2.045333_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045333
Chromosome:chromosome 17
Location:3782793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726850 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2); Similar to Sjogren Syndrome Antigen A2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGGAAGCACGGCTTCAGGCAGTTAGGGAATGGTGGGTGCACGCACA
Internal bar code:AAATCGCCGTGAGGCTCGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2722
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTCCGAGTCTGAATCG
Suggested primer 2:CAGACCAACAACCTTGCAGC