Insertion junction: CLIP2.045333_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045333
Chromosome:chromosome 17
Location:3782793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726850 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2); Similar to Sjogren Syndrome Antigen A2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGCGGGTGTACGCTAGCCTCTGCCCATCAGTCCCATCATCCCAGTTG
Internal bar code:AGCTTATTGATCCCACACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACCAACAACCTTGCAGC
Suggested primer 2:CCCACTCCGAGTCTGAATCG