Insertion junction: CLIP2.045381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045381
Chromosome:chromosome 13
Location:1490565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572500 COA2,CGL14 (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGGGCAGTAGCAGGCGCAGCGTCAGCCCCAGGTGCAGGGGCAGCGGC
Internal bar code:AGTACTCGTAAGGCTAGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGCGCAGTTGAAGAAA
Suggested primer 2:TTTCGATTGTGCGAGAGGCT