Insertion junction: CLIP2.045457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045457
Chromosome:chromosome 1
Location:5927543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042200 PBA1,PBAS1 Photosystem II Associated Subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTGATGACAGGCGCCAGCGCCCATAGACGGCAGGCTAGGCAGGCAGC
Internal bar code:AGGTACCTGGGGAGCGGGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2367
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCTTCATGACCGAGT
Suggested primer 2:GCATTCGTGCTTAGCTTCGG