Insertion junction: CLIP2.045457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045457
Chromosome:chromosome 1
Location:5927555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042200 PBA1,PBAS1 Photosystem II Associated Subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACATCCTGCTTAGCAGCACCAAACCAACGCTGATAGAACCCGGCA
Internal bar code:CAGTCGGAGAGACCGCCTTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCGTGCTTAGCTTCGG
Suggested primer 2:CCACTGCTTCATGACCGAGT