Insertion junction: CLIP2.045618_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045618
Chromosome:chromosome 12
Location:3147259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500550 (1 of 2) PTHR10579 - CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGATGTAATATTGTGCACTGAGCAATATACCAGAAACCGCTGGCTAG
Internal bar code:TGTCGGCTGTGGACCTACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGACGTAGGAAGGGACAT
Suggested primer 2:ATGCGGGTGTCGTAGTTGTT