Insertion junction: CLIP2.045618_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045618
Chromosome:chromosome 12
Location:3147326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500550 (1 of 2) PTHR10579 - CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAAAGGCCAGGCGACAACCGATACGCCTGCAGACGTCGCTCATCGGT
Internal bar code:TGTCGGCTGTGGACCTACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1158
LEAP-Seq percent confirming:40.5797
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGGTGTCGTAGTTGTT
Suggested primer 2:TGGGACGTAGGAAGGGACAT