Insertion junction: CLIP2.046495_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046495
Chromosome:chromosome 11
Location:4277175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482150 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACACCGCAACCCTGGCTGCTACAGCCGTCGCCCGCAGCGCCGCGGC
Internal bar code:CCAGCAAGAACAACAGGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:10.8696
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCTGCTGGTCCATGAG
Suggested primer 2:TGCTCACAGACACCAACCTG