Insertion junction: CLIP2.046506_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046506
Chromosome:chromosome 12
Location:9322145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542050 CDS
Cre12.g542100 (1 of 2) 3.4.21.26 - Prolyl oligopeptidase / Prolyl endopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGTGTCGGACTGCTGCTGCTTGCTGCTGCCGCGCATGTAGAGCGGCA
Internal bar code:AAATGGTACAGGTGAAACTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCCCTACGTTCACACA
Suggested primer 2:GCAACTGAAACCTGTGCTGG