Insertion junction: CLIP2.046600_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046600
Chromosome:chromosome 12
Location:3147367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500550 (1 of 2) PTHR10579 - CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCGGTCGCTACCAATGTCGACGACACAGTCTCAGAACACAGCGGTT
Internal bar code:GCTCCATGGTTAAATAGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGGTGTCGTAGTTGTT
Suggested primer 2:TGGGACGTAGGAAGGGACAT