Insertion junction: CLIP2.046623_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046623
Chromosome:chromosome 1
Location:4513193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030850 POA4 20S proteasome alpha subunit D; (1 of 1) K02731 - 20S proteasome subunit alpha 4 (PSMA7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCAATGTGCAGGTGTGCGTGCTGGGCACTCGTGATGGAACATGGCAA
Internal bar code:CTGTGGGGCGTGATACATTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1715
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGGTGCTTGTGCTTGTG
Suggested primer 2:GGTTAAGACTGGTCCACGGG