Insertion junction: CLIP2.046662_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046662
Chromosome:chromosome 6
Location:2712490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270850 SRH12 (1 of 1) K10841 - DNA excision repair protein ERCC-6 (ERCC6, CSB, RAD26); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCTACGCCAACGCCAGCAGCCTGCAGGTGACCACCGCCTATAAGT
Internal bar code:AGAAGTAGTGCAAGTCTGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGTGTTGGTGTTGGT
Suggested primer 2:CGGATTCGGAGATCACCCTG