Insertion junction: CLIP2.046822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046822
Chromosome:chromosome 5
Location:3358398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232751 (1 of 2) PTHR23518:SF2 - MULTIDRUG RESISTANCE PROTEIN MDTH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTCTACCGTCTACCACTTCCTTAACTAATCATGAATGTACCCCCCCC
Internal bar code:CCTGTGTTCTCATCTCCCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGACTCTTGGGCATCAC
Suggested primer 2:ACTCCAGTGCCTGTGTTACG