Insertion junction: CLIP2.046828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046828
Chromosome:chromosome 5
Location:3357578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232751 (1 of 2) PTHR23518:SF2 - MULTIDRUG RESISTANCE PROTEIN MDTH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCATCTGCATGCGGGCTGCTCACCCGAGCCAGCTGCAAGCTCCCGCCC
Internal bar code:CAACGCGGTCCTCTAACCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAGATCCTTGCACCTT
Suggested primer 2:ACACGGTATTCGCAAACCCT