Insertion junction: CLIP2.046828_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046828
Chromosome:chromosome 5
Location:3357581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232751 (1 of 2) PTHR23518:SF2 - MULTIDRUG RESISTANCE PROTEIN MDTH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCGCCGTGTGGGGGGACATGTCAATAACACATACTCCAGTGCCTGT
Internal bar code:GTTATGGTAGTACGTTGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGTATTCGCAAACCCT
Suggested primer 2:CACCCAGATCCTTGCACCTT