Insertion junction: CLIP2.047148_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047148
Chromosome:chromosome 3
Location:6754258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196450 (1 of 1) K15178 - RNA polymerase-associated protein RTF1 (RTF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAACTGTGCACCAAGTTATTGCCTGCGTGTTGACAGGCCGCTGAGGA
Internal bar code:TTGGATAGTCAGACGGAAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3230
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGGGGAGGAAAGGAC
Suggested primer 2:ACTGGGACTGGTGCGTTATG