Insertion junction: CLIP2.047443_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047443
Chromosome:chromosome 11
Location:3781716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479300 SRH20 SNF2-related DNA/RNA helicase; (1 of 1) K15083 - DNA repair protein RAD16 (RAD16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCGGCCGGAAAGGGCGGTTGGTGGCGGCAACCCAGCATGCCAAGTA
Internal bar code:AGACCCTATAAGGGTGGACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCTTGCTGTGTTGTCTG
Suggested primer 2:CCCCAAACCCTCTCAATCCC