Insertion junction: CLIP2.047539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047539
Chromosome:chromosome 12
Location:8327215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550900 SSD3 Sterol sensing domain protein; (1 of 1) K12385 - Niemann-Pick C1 protein (NPC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCCCGGGCTCCCCGCCTCACCCGCTGCGATGTAGAGCAGCATGAAG
Internal bar code:GCGCGCCCAATTCAATCGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1660
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCACGCCAGATGTTGTT
Suggested primer 2:GGTGGGTGTGGGTCAGTATG