Insertion junction: CLIP2.047687_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047687
Chromosome:chromosome 11
Location:3782735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479300 SRH20 SNF2-related DNA/RNA helicase; (1 of 1) K15083 - DNA repair protein RAD16 (RAD16) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCACGGACTCGGATTCGGATGAGGATGAGGAGGACGAGAGCGAGAGC
Internal bar code:ATAAGCTCCGTTTACGCTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACACACAGACCACCCA
Suggested primer 2:AGGAGGAGGTGGAGGATGAC