Insertion junction: CLIP2.047687_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047687
Chromosome:chromosome 11
Location:3782737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479300 SRH20 SNF2-related DNA/RNA helicase; (1 of 1) K15083 - DNA repair protein RAD16 (RAD16) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGTCCACCGCCTCATCCGCATCATCGCCATCACCGCTCCCCGAGTC
Internal bar code:ATAAGCTCCGTTTACGCTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1465
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGTGGAGGATGAC
Suggested primer 2:CATCACACACAGACCACCCA