Insertion junction: CLIP2.047931_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047931
Chromosome:chromosome 6
Location:944255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256350 (1 of 3) 1.1.2.6 - Polyvinyl alcohol dehydrogenase (cytochrome) / PVADH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGTCGGTCACGTACAGCGTTCATTCATGTCCCGGATGTGCACTGAG
Internal bar code:GCGCGATCATTAAACATACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3766
LEAP-Seq percent confirming:80.6122
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGATGCATGCATGTGG
Suggested primer 2:CCAAGTTTGCGAAACCCTGG