Insertion junction: CLIP2.047931_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047931
Chromosome:chromosome 6
Location:944298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256350 (1 of 3) 1.1.2.6 - Polyvinyl alcohol dehydrogenase (cytochrome) / PVADH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGGTGCACACAATTGATGAGTGGTGCAGTCGCAGGGTTGTGGACCC
Internal bar code:GCGCGATCATTAAACATACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1401
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGTTTGCGAAACCCTGG
Suggested primer 2:CGACTGATGCATGCATGTGG