Insertion junction: CLIP2.047946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047946
Chromosome:chromosome 13
Location:908531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567750 PRP18 Pre-mRNA splicing factor; (1 of 1) K12817 - pre-mRNA-splicing factor 18 (PRPF18, PRP18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCCACATTATTGAGGGAGGCGTGTTGATTGGTGCTGACGGTGTGTCA
Internal bar code:GTTTTTGGGACCTGGACGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1698
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCGCACCTTGTCTTTAT
Suggested primer 2:ACGGCCCCAACATGATTCAT