Insertion junction: CLIP2.048024_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048024
Chromosome:chromosome 12
Location:9318922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542100 (1 of 2) 3.4.21.26 - Prolyl oligopeptidase / Prolyl endopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATAGTCGTAATCTCAGTAGATGCACAAGCACTTGTCCACAACATCTA
Internal bar code:GAGGGCATACCGGATACAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGGTCATCAGTGTGCAC
Suggested primer 2:CGTTCTGCTTGTTGTGGGTG