Insertion junction: CLIP2.048091_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048091
Chromosome:chromosome 16
Location:3163577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665300 (1 of 1) PTHR24006:SF329 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 44 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCAGCCCCTTTTCCCGTGACCGGGGAACACTTGTCCCCTTGTCGTG
Internal bar code:AAATTTCATTTAATTCTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATTTGCGTTTCAAGGGC
Suggested primer 2:TGACCAGTGCCTGTACGAAC