Insertion junction: CLIP2.048106_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048106
Chromosome:chromosome 3
Location:4889707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178600 TOP1 DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGGACCCGCGCATCACCGTGGCCTGGTGCAAGCGCAACGAGGTGCC
Internal bar code:GCACCTAATACAAGAGCGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1328
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTATCCGTACAACCGCTC
Suggested primer 2:GCACACCAACCAGATGGAGA