Gene: Cre03.g178600

Overview

Common name:TOP1
Defline:DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1)
Description:Similar to DNA topoisomerase I in Arabidopsis, At5g55310.
Synonyms:g3698.t1,TOP1
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre06.g256850 SND1B Cre03.g178600 TOP1 Wang et al. 2023
Cre06.g285401 HLP1,FAP355 Cre03.g178600 TOP1 Wang et al. 2023
Cre16.g672300 Cre03.g178600 TOP1 Wang et al. 2023

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.048106_1 CLIP2.048106 CDS 80 6.1
CLIP2.055651_1 CLIP2.055651 CDS 80 6.1
CLIP2.055651_2 CLIP2.055651 CDS 80 6.1
CLIP2.063148_1 CLIP2.063148 3'UTR 80 6.1
CLIP2.063148_2 CLIP2.063148 3'UTR 80 6.1
CLIP2.064661_1 CLIP2.064661 3'UTR 80 6.1
CLIP2.064661_2 CLIP2.064661 3'UTR 80 6.1
CLIP2.065687_1 CLIP2.065687 3'UTR 80 6.1
CLIP2.065687_2 CLIP2.065687 3'UTR 80 6.1
CLIP2.073842_1 CLIP2.073842 3'UTR 80 6.1
CLIP2.073842_2 CLIP2.073842 3'UTR 80 6.1

Gene Annotations

PFAM:PF01028, PF02919, PF14370
PANTHER: PTHR10290 PTHR10290:SF3
KEGG_ec:EC:5.99.1.2
KEGG_orthology:K03163
KOG:KOG0981
Gene ontology terms::GO:0003677, GO:0003917, GO:0003918, GO:0005694, GO:0006265
Best arabidopsis TAIR name:AT5G55310
Best arabidopsis TAIR symbol:TOP1,TOP1BETA
Best arabidopsis TAIR defline:DNA topoisomerase 1 beta
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.