Insertion junction: CLIP2.055651_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055651
Chromosome:chromosome 3
Location:4890123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178600 TOP1 DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCAGCGCTCGGTGCCCAAGACGCACACCAACCAGATGGAGAAGATCC
Internal bar code:AACTGGATATACCTTAGGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2750
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCCGGACAAGTTACTG
Suggested primer 2:CATCGAGATCATGGGCGACA