Insertion junction: CLIP2.064661_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064661
Chromosome:chromosome 3
Location:4889213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178600 TOP1 DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTTCTTGATGACGTGGTTGTGCGTGGAGGGGAAAATGGCGGGCGACA
Internal bar code:AATCTCTCGGTGTCTGTGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTCCCGGGTTGCTTTG
Suggested primer 2:GCACACCAACCAGATGGAGA