Insertion junction: CLIP2.055651_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055651
Chromosome:chromosome 3
Location:4890124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178600 TOP1 DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACAGGATGGCCACCTGCGGGAGCGGCGCAGCGGCACATGGCAACGGC
Internal bar code:GCAGTGTGAGGCCTCGGACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4989
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGAGATCATGGGCGACA
Suggested primer 2:ATGGCCCGGACAAGTTACTG