Insertion junction: CLIP2.065687_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065687
Chromosome:chromosome 3
Location:4888808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178600 TOP1 DNA topoisomerase I; (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTGTGTGATGCCAACGTGCACGCACCGTCGCACCGCCTTCCTCCCCC
Internal bar code:GGGAGAAACTGTGCTATGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2211
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCTTGGTTCACTCGGCC
Suggested primer 2:GCTAGCTGCCCCTTTCTTGA