Insertion junction: CLIP2.048231_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048231
Chromosome:chromosome 17
Location:1307326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705450 LCI26 Low-CO2-induced U-box protein; (1 of 1) PTHR22849//PTHR22849:SF45 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGGCGACACGCGAGCGGCAGGTTACGAATAGGACGGCAACTGTGCG
Internal bar code:TCCTTATTCGGGAGATCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCGCTCATTTTACCGG
Suggested primer 2:TACTCCTCCAGAACGGCGTA