Insertion junction: CLIP2.048371_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048371
Chromosome:chromosome 3
Location:8079889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201250 (1 of 1) PF01585//PF12171 - G-patch domain (G-patch) // Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTGAAGGGCTGGGTGACCAGGGGGCGGCGGTAGGGCATCCAAGCAGG
Internal bar code:CTTATAATCTAGACCCTGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGCACTTGACCCAGAG
Suggested primer 2:TATTGAGCGACCGATCTGGC