Insertion junction: CLIP2.048604_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048604
Chromosome:chromosome 11
Location:370491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467579 CSC6 Chlamydomonadale-specific family C protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAGGGGGCGGGCGAACTCAGAAACGACTGATGCAGGGGCCATACATC
Internal bar code:AGGGAGCACCGAGCCAGTCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3675
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCTGGCACCTGCTCCTT
Suggested primer 2:ACCCACTGCTGCTGAGAATC