Insertion junction: CLIP2.048744_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048744
Chromosome:plastome
Location:67365
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802292 ccsA,ChreCp028,2717027,ycf5 (1 of 1) PTHR30071//PTHR30071:SF8 - HEME EXPORTER PROTEIN C // CYTOCHROME C BIOGENESIS PROTEIN CCSA; cytochrome c biogenesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACAGGGTTAATCGGTAAATAAGTTGTAGAAACATTAATATTGTTTGC
Internal bar code:GTACGGCTCACCGTTAGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:48.9796
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTCTTGTGCGAACAAGG
Suggested primer 2:TTCATTAGCCCACACAGCCC