Insertion junction: CLIP2.048746_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048746
Chromosome:chromosome 6
Location:6185667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292000 (1 of 1) PF00790//PF03127 - VHS domain (VHS) // GAT domain (GAT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGAAAGCACCCCGCCCCCCCTGCCCTTCTCCCCCACTCACCGCCGC
Internal bar code:TGGGAGGTTTTTCAGGCTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCATAGTTGGGGCTGGTGTT
Suggested primer 2:CGGGTTCGTCGTCAAAGTTG