Gene: Cre06.g292000

Overview

Common name:
Defline:	(1 of 1) PF00790//PF03127 - VHS domain (VHS) // GAT domain (GAT)
Description:
Synonyms:	g6765.t1
Chromosome:	chromosome 6

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.016201_1	CLIP2.016201	CDS	80	6.1
CLIP2.027782_1	CLIP2.027782	intron	80	6.1
CLIP2.027782_2	CLIP2.027782	intron	80	6.1
CLIP2.042639_1	CLIP2.042639	CDS	80	6.1
CLIP2.047075_1	CLIP2.047075	intron	80	6.1
CLIP2.047075_2	CLIP2.047075	intron	80	6.1
CLIP2.048746_1	CLIP2.048746	intron	80	6.1
CLIP2.048746_2	CLIP2.048746	intron	80	6.1
CLIP2.062144_1	CLIP2.062144	3'UTR	80	6.1
CLIP2.062144_2	CLIP2.062144	3'UTR	80	6.1
CLIP2.066930_1	CLIP2.066930	3'UTR	80	6.1
CLIP2.066930_2	CLIP2.066930	3'UTR	80	6.1
LMJ.RY0402.103001_1	LMJ.RY0402.103001	intron	95	5.5
LMJ.RY0402.103001_2	LMJ.RY0402.103001	intron	95	5.5
LMJ.RY0402.132550_1	LMJ.RY0402.132550	intron	58	5.5
LMJ.RY0402.134895_1	LMJ.RY0402.134895	gene_edge/mRNA_edge/5'UTR	95	5.5
LMJ.RY0402.161500_2	LMJ.RY0402.161500	intron	95	5.5
LMJ.RY0402.161500_3	LMJ.RY0402.161500	intron	95	5.5
LMJ.RY0402.179533_1	LMJ.RY0402.179533	intron	73	5.5
LMJ.RY0402.194079_2	LMJ.RY0402.194079	CDS	73	5.5
LMJ.RY0402.225539_1	LMJ.RY0402.225539	intron	73	5.5

Gene Annotations

PFAM:	PF00790, PF03127
PANTHER:	PTHR13856
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005622, GO:0006886
Best arabidopsis TAIR name:	AT5G16880
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Target of Myb protein 1
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Tunicamycin, screen 2 of 3 ( 87% confidence (FDR = 0.13))

Tunicamycin, screen 3 of 3 ( 80% confidence (FDR = 0.2))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.