Insertion junction: CLIP2.049019_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049019
Chromosome:chromosome 2
Location:3952841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102350 ATG3,APG3 Autophagy-related protein; (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGTAACGCGCAACGGTGCGTGCCCACGGGATACGGTATCTGCCTAA
Internal bar code:CGGGGTTCAAGGTCCAGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2220
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTCGCTGTTGGGGTTG
Suggested primer 2:CGAGTACGATGCTGGCTCAT