Insertion junction: CLIP2.049886_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049886
Chromosome:chromosome 8
Location:3267243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377200 SRH16 (1 of 1) PTHR10799//PTHR10799:SF788 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN MI-2 HOMOLOG; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCAACCTCCCTCCATACAAACACCCACACACACGCACTCGCCCGGCA
Internal bar code:GTTATGGTGGTCCGCTTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCAGCCGCGTTGTTAC
Suggested primer 2:CTGGTTCTGGGTCATGGCAT